Create dataset for STAR-Salmon expression quantification results

With a level-3 manifest that is created from annotate_expression, calls new_dataset to make quantification files (.sf) into dataset. Uses latest version of the files and creates a "Draft" dataset. See nf_sarek_datasets.

Usage

nf_star_salmon_datasets(manifest, parent, dry_run = TRUE)

Arguments

manifest

A table of annotated data manifest from annotate_expression.

parent

Synapse id of parent project where the dataset will live.

dry_run

If TRUE, don't actually store dataset, just return the data object for inspection or further modification.