Create dataset for STAR-Salmon expression quantification results — nf_star_salmon

With a level-3 manifest that is created from annotate_expression, calls new_dataset to make quantification files (.sf) into dataset. Uses latest version of the files and creates a "Draft" dataset. See nf_sarek_datasets.

Usage

nf_star_salmon_datasets(manifest, parent, dry_run = TRUE)

Arguments

manifest: A table of annotated data manifest from annotate_expression.
parent: Synapse id of parent project where the dataset will live.
dry_run: If TRUE, don't actually store dataset, just return the data object for inspection or further modification.