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Annotate quantified expression output

Source: R/nextflow_annotation_utils.R
annotate_quantified_expression.Rd

Given a manifest, annotate data as level 3 processed expression data, using defaults from star_salmon processing. Returns a "partial" manifest, which can be adjusted as needed, e.g. add additional comments or batch info.

Usage

annotate_quantified_expression(metadata, workflow_link, verbose = TRUE)

Arguments

metadata

Metadata table to build upon.

Workflow link to most specific part of workflow generating these data.

verbose

Give verbose reports for what's happening.