Create reference file for new cancer type — cbp_new_cancer_type • nfportalutils

Helper for creating reference for new cancer subtype which does not already exist. https://docs.cbioportal.org/file-formats/#cancer-type

Usage

cbp_new_cancer_type(type_of_cancer, name, color, parent_type_of_cancer)

Arguments

type_of_cancer: Id for new cancer type, e.g. "cnf".
name: Full name for new cancer type, e.g. "Cutaneous Neurofibroma"
color: Color name for new cancer; https://en.wikipedia.org/wiki/Web_colors#X11_color_names.
parent_type_of_cancer: Id of existing parent, e.g. "nfib" for Neurofibroma.